Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs13203816 | chr6:28079598 | T/C | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13204012 | chr6:28201531 | G/A | 2.34E-7 | 213 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13204572 | chr6:26189356 | G/C | 3.76E-7 | 214 | 15.07 | 18.65 | 9.77 | KM Plot |
| KIRP | rs13205211 | chr6:28203056 | T/G | 2.34E-7 | 213 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13205911 | chr6:28124114 | C/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13207345 | chr6:28265572 | C/T | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13207689 | chr6:27369704 | C/G | 3.16E-7 | 212 | 16.5 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13208096 | chr6:28225311 | C/G | 2.33E-7 | 213 | 16.45 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13209332 | chr6:27520752 | T/A | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13210340 | chr6:26326314 | G/C | 2.23E-7 | 212 | 15.2 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13210634 | chr6:27646492 | A/G | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13212093 | chr6:27606716 | C/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13212318 | chr6:27688841 | A/C | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13212562 | chr6:27300310 | A/G | 0.000324 | 210 | 16.5 | 16.68 | 2.87 | KM Plot |
| KIRP | rs13212651 | chr6:27806985 | A/G | 1.98E-7 | 214 | 16.5 | 12 | 9.77 | KM Plot |